Microbial Genome Sequencing Project
Project Overview
Map of Strains
Phylogenetic Trees
List of Strains
List of Strains
Download List (Excel)
Major Lineage
Genus, Species and Strain
Researcher(s)
Status
Actinobacteria
Janibacter
sp. HTCC2649
Stephen Giovannoni
Jang-Cheon Cho
Released to GenBank
Actinobacteria
Unnamed Actinobacterium PHSC20c1
Alison Murray
Released to GenBank
Alphaproteobacteria
Roseovarius
sp. 217
J. Colin Murrell
Hendrik Schaefer
Released to GenBank
Alphaproteobacteria
Loktanella vestfoldensis
SKA53
Åke Hagström
Released to GenBank
Alphaproteobacteria
Roseobacter
sp. MED193
Jarone Pinhassi
Carlos Pedrós-Alió
Released to GenBank
Alphaproteobacteria
Aurantimonas
sp. SI85-9A1
Bradley Tebo
Released to GenBank
Alphaproteobacteria
Nitrobacter
sp. Nb-311A
John Waterbury
Released to GenBank
Alphaproteobacteria
Fulvimarina pelagi
HTCC2506
Stephen Giovannoni
Jang-Cheon Cho
Released to GenBank
Alphaproteobacteria
Erythrobacter litoralis
HTCC2594
Stephen Giovannoni
Jang-Cheon Cho
Released to GenBank
Alphaproteobacteria
Unnamed Rhodobacterales bacterium HTCC2654
Stephen Giovannoni
Jang-Cheon Cho
Released to GenBank
Alphaproteobacteria
Erythrobacter
sp. NAP1
Paul Falkowski
Released to GenBank
Alphaproteobacteria
Roseovarius
sp. HTCC2601
Stephen Giovannoni
Jang-Cheon Cho
Released to GenBank
Alphaproteobacteria
Sphingomonas
sp. SKA58
Åke Hagström
Released to GenBank
Alphaproteobacteria
Sulfitobacter
sp. EE-36
Mary Ann Moran
Released to GenBank
Alphaproteobacteria
Sulfitobacter
sp. NAS-14.1
Mary Ann Moran
Released to GenBank
Alphaproteobacteria
Roseovarius nubinhibens
ISM
Mary Ann Moran
Released to GenBank
Alphaproteobacteria
Candidatus "Pelagibacter ubique"
HTCC1002
Stephen Giovannoni
Jang-Cheon Cho
Released to GenBank
Alphaproteobacteria
Parvularcula bermudensis
HTCC2503
Stephen Giovannoni
Jang-Cheon Cho
Released to GenBank
Alphaproteobacteria
Oceanicola granulosus
HTCC2516
Stephen Giovannoni
Jang-Cheon Cho
Released to GenBank
Alphaproteobacteria
Oceanicola batsensis
HTCC2597
Stephen Giovannoni
Jang-Cheon Cho
Released to GenBank
Alphaproteobacteria
Oceanicaulis alexandrii
HTCC2633
Stephen Giovannoni
Jang-Cheon Cho
Released to GenBank
Alphaproteobacteria
Unnamed Rhodobacterales bacterium HTCC2083
Stephen Giovannoni
Jang-Cheon Cho
Released to GenBank
Alphaproteobacteria
Octadecabacter antarcticus
307
Boris Wawrik
Thorsten Brinkhoff
Meinhard Simon
Released to GenBank
Alphaproteobacteria
Octadecabacter antarcticus
238
Boris Wawrik
Thorsten Brinkhoff
Meinhard Simon
Released to GenBank
Alphaproteobacteria
Roseobacter litoralis
Och 149
Boris Wawrik
Thorsten Brinkhoff
Meinhard Simon
Released to GenBank
Alphaproteobacteria
Phaeobacter gallaeciensis
BS107
Boris Wawrik
Thorsten Brinkhoff
Meinhard Simon
Released to GenBank
Alphaproteobacteria
Roseobacter
sp. GAI-101
Rob Edwards
Released to GenBank
Alphaproteobacteria
Roseobacter
sp. AzwK-3b
Chris Francis
Released to GenBank
Alphaproteobacteria
Unnamed Rhodobacterales bacterium HTCC2150
Stephen Giovannoni
Kevin Vergin
Released to GenBank
Alphaproteobacteria
Unnamed Rhodobacterales bacterium HTCC2255
Stephen Giovannoni
Jang-Cheon Cho
Released to GenBank
Alphaproteobacteria
Candidatus Pelagibacter
sp. HTCC7211
Stephen Giovannoni
Released to GenBank
Alphaproteobacteria
Roseovarius
sp. TM1035
Robert Belas
Released to GenBank
Alphaproteobacteria
Unnamed alphaproteobacterium BAL199
Åke Hagström
Released to GenBank
Alphaproteobacteria
Brevundimonas
sp. BAL3
Åke Hagström
Released to GenBank
Alphaproteobacteria
Labrenzia aggregata
IAM12614
Gary King
Released to GenBank
Alphaproteobacteria
Roseobacter
sp. CCS2
Mary Ann Moran
Released to GenBank
Alphaproteobacteria
Unnamed Rhodobacterales bacterium Y4I
Mary Ann Moran
Alison Buchan
Released to GenBank
Alphaproteobacteria
Sagittula stellata
E-37
Mary Ann Moran
Released to GenBank
Alphaproteobacteria
Phaeobacter gallaeciensis
2.10
Staffan Kjelleberg
Torsten Thomas
Released to GenBank
Alphaproteobacteria
Erythrobacter
sp. SD-21
Bradley Tebo
Released to GenBank
Alphaproteobacteria
Labrenzia alexandrii
DFL-11
Irene Wagner-Dobler
Released to GenBank
Alphaproteobacteria
Hoeflea phototrophica
DFL-43
Irene Wagner-Dobler
Released to GenBank
Alphaproteobacteria
Oceanibulbus indolifex
HEL-45
Irene Wagner-Dobler
Released to GenBank
Alphaproteobacteria
Roseobacter
sp. SK209-2-6
Bess Ward
Released to GenBank
Alphaproteobacteria
Unnamed Rhodobacteraceae bacterium KLH11
Russell Hill
Released to GenBank
Alphaproteobacteria
Ruegeria
sp. R11
Staffan Kjelleberg
Rebecca Case
Released to GenBank
Alphaproteobacteria
Unnamed alphaproteobacterium HIMB59
Michael Rappé
Released to GenBank
Alphaproteobacteria
Silicibacter
sp. TrichCH4B
Elizabeth Mann
Kathy Barbeau
Released to GenBank
Alphaproteobacteria
Citreicella
sp. SE45
Alison Buchan
Released to GenBank
Alphaproteobacteria
Pseudovibrio
sp. JE062
Russell Hill
Released to GenBank
Alphaproteobacteria
Thalassiobium
sp. R2A62
Marcelino Suzuki
Released to GenBank
Alphaproteobacteria
Silicibacter lacuscaerulensis
ITI-1157
Erik Zinser
Alison Buchan
Released to GenBank
Alphaproteobacteria
Loktanella
sp. SE62
Alison Buchan
Released to GenBank
Alphaproteobacteria
Thalassospira
sp. TrichSKD10
Elizabeth Mann
Kathy Barbeau
Released to GenBank
Alphaproteobacteria
Roseibium
sp. TrichSKD4
Elizabeth Mann
Kathy Barbeau
Released to GenBank
Alphaproteobacteria
Unnamed SAR11 alphaproteobacterium HIMB114
Michael Rappé
Released to GenBank
Alphaproteobacteria
Unnamed SAR11 alphaproteobacterium HIMB5
Michael Rappé
In Progress
Alphaproteobacteria
Ahrensia
sp. R2A130
Marcelino Suzuki
Released to GenBank
Alphaproteobacteria
Roseobacter
sp. R2A57
Marcelino Suzuki
Released to GenBank
Aquificae
Hydrogenivirga
sp. 128-5-R1-1
Anna-Louise Reysenbach
Released to GenBank
Betaproteobacteria
Limnobacter
sp. MED105
Jarone Pinhassi
Carlos Pedrós-Alió
Released to GenBank
Betaproteobacteria
Unnamed Methylophilales bacterium HTCC2181
Stephen Giovannoni
Kevin Vergin
Released to GenBank
Betaproteobacteria
Unnamed betaproteobacterium KB13
Michael Rappé
Released to GenBank
Betaproteobacteria
Thauera aromatica
3CB2
Bongkeun Song
In Progress
Chloroflexi
Dehalobium chlorocoercia
DF-1
Kevin Sowers
Harold May
Released to GenBank
Crenarchaeota
Unnamed Thermoprotei BD31
Chris Francis
In Progress
Crenarchaeota
Unnamed Thermoprotei BG20
Chris Francis
In Progress
Cyanobacteria
Gloeothece
sp. PCC6909/1
Dilara Sharif
Geertje Van Keulen
Released to GenBank
Cyanobacteria
Synechococcus
sp. CB0205
Feng Chen
Eric Wommack
Released to GenBank
Cyanobacteria
Synechococcus
sp. CB0101
Feng Chen
Eric Wommack
Jacques Ravel
Released to GenBank
Cyanobacteria
Acaryochloris
sp. CCMEE5410
Scott Miller
In Progress
Cyanobacteria
Cyanothece
sp. CCY0110
Lucas Stal
Released to GenBank
Cyanobacteria
Synechococcus
sp. PCC7335
Nicole Tandeau de Marsac
Released to GenBank
Cyanobacteria
Microcoleus chthonoplastes
PCC7420
Nicole Tandeau de Marsac
Released to GenBank
Cyanobacteria
Prochlorococcus
sp. UH18301
Erik Zinser
Released to GenBank
Cyanobacteria
Synechococcus
sp. WH8109
Debbie Lindell
Released to GenBank
Cyanobacteria
Calothrix
sp. SC01
Jonathan Zehr
In Progress
Cyanobacteria
Prochlorococcus marinus
MIT9202
Sallie (Penny) Chisholm
Released to GenBank
Cyanobacteria
Cyanobium
sp. PCC7001
Emily Lilly
Released to GenBank
Cyanobacteria
Prochlorococcus marinus
MIT9301
Sallie (Penny) Chisholm
Released to GenBank
Cyanobacteria
Prochlorococcus marinus
NATL1A
Sallie (Penny) Chisholm
Released to GenBank
Cyanobacteria
Nodularia spumigena
CCY9414
Lucas Stal
Released to GenBank
Cyanobacteria
Lyngbya
sp. CCY9616 (= PCC8106)
Lucas Stal
Released to GenBank
Cyanobacteria
Synechococcus
sp. BL107
David Scanlan
Released to GenBank
Cyanobacteria
Synechococcus
sp. RS9916 (= RCC555)
David Scanlan
Released to GenBank
Cyanobacteria
Synechococcus
sp. RS9917 (= RCC556)
David Scanlan
Released to GenBank
Cyanobacteria
Synechococcus
sp. WH5701
David Scanlan
Released to GenBank
Cyanobacteria
Synechococcus
sp. WH7805
David Scanlan
Released to GenBank
Cyanobacteria
Prochlorococcus marinus
MIT9211
Sallie (Penny) Chisholm
Released to GenBank
Cyanobacteria
Prochlorococcus marinus
MIT9515
Sallie (Penny) Chisholm
Released to GenBank
Cyanobacteria
Prochlorococcus marinus
AS9601
Sallie (Penny) Chisholm
Released to GenBank
Cyanobacteria
Prochlorococcus marinus
MIT9303
Sallie (Penny) Chisholm
Released to GenBank
Deltaproteobacteria
Plesiocystis pacifica
SIR-1
Larry Shimkets
Released to GenBank
Deltaproteobacteria
Unnamed deltaproteobacterium anaconda
Victor Gallardo
In Progress
Deltaproteobacteria
Desulfonema limicola
Jadebusen (DSM 2076)
Gerard Muyzer
In Progress
Deltaproteobacteria
Desulfosarcina variabilis
Montpellier (DSM 2060)
Gerard Muyzer
In Progress
Deltaproteobacteria
Desulfonema magnum
Montpellier (DSM 2077)
Gerard Muyzer
In Progress
Epsilonproteobacteria
Sulfurospirillum
sp. Am-N
Barbara Campbell
Released to GenBank
Epsilonproteobacteria
Unnamed Campylobacterales bacterium GD1
Matthias Labrenz
Klaus Jürgens
Released to GenBank
Epsilonproteobacteria
Caminibacter mediatlanticus
TB-2 DSM16658
Costantino Vetriani
Released to GenBank
Euryarchaeota
Aciduliprofundum boonei
T469
Anna-Louise Reysenbach
Released to GenBank
Euryarchaeota
Thermococcus barophilus
MP (DSMZ11836)
Viggó Thór Marteinsson
Released to GenBank
Euryarchaeota
Thermococcus
sp. AM4
Doug Bartlett
Elizaveta Bonch-Osmolovskaya
Released to GenBank
Euryarchaeota
Methanogenium frigidum
Ace-2 (= SMCC459W)
Rick Cavicchioli
Kevin Sowers
Released to GenBank
Firmicutes
Bacillus
sp. NRRL B-14911
Janet Siefert
Released to GenBank
Firmicutes
Carnobacterium
sp. AT7
Doug Bartlett
Released to GenBank
Firmicutes
Carboxydibrachium pacificum
JM (DSM12653)
Juan González
Tatyana Sokolva
Released to GenBank
Firmicutes
Bacillus
sp. SG-1
Bradley Tebo
Released to GenBank
Firmicutes
Bacillus
sp. B14905
Rob Edwards
Released to GenBank
Flavobacteria
Algoriphagus
sp. PR1
Nicole King
Released to GenBank
Flavobacteria
Unnamed Flavobacterium SCB49
Åke Hagström
Released to GenBank
Flavobacteria
Unnamed Flavobacterium BAL38
Åke Hagström
Released to GenBank
Flavobacteria
Unnamed Flavobacteriales bacterium ALC-1
Farooq Azam
Released to GenBank
Flavobacteria
Dokdonia donghaensis
MED134
Jarone Pinhassi
Carlos Pedrós-Alió
Released to GenBank
Flavobacteria
Polaribacter irgensii
23-P
Alison Murray
Released to GenBank
Flavobacteria
Leeuwenhoekiella blandensis
MED217
Jarone Pinhassi
Carlos Pedrós-Alió
Released to GenBank
Flavobacteria
Polaribacter dokdonensis
MED152
Jarone Pinhassi
Carlos Pedrós-Alió
Released to GenBank
Flavobacteria
Psychroflexus torquis
ATCC700755
John Bowman
Released to GenBank
Flavobacteria
Unnamed Flavobacterium BBFL7
Farooq Azam
Released to GenBank
Flavobacteria
Unnamed Flavobacteriales bacterium HTCC2170
Stephen Giovannoni
Jang-Cheon Cho
Released to GenBank
Flavobacteria
Robiginitalea biformata
HTCC2501
Stephen Giovannoni
Jang-Cheon Cho
Released to GenBank
Flavobacteria
Croceibacter atlanticus
HTCC2559
Stephen Giovannoni
Jang-Cheon Cho
Released to GenBank
Gammaproteobacteria
Vibrio campbellii
AND4
Åke Hagström
Released to GenBank
Gammaproteobacteria
Unnamed gammaproteobacterium HTCC2080
Stephen Giovannoni
Kevin Vergin
Released to GenBank
Gammaproteobacteria
Unnamed gammaproteobacterium HTCC2143
Stephen Giovannoni
Jang-Cheon Cho
Released to GenBank
Gammaproteobacteria
Unnamed gammaproteobacterium HTCC2207
Stephen Giovannoni
Jang-Cheon Cho
Released to GenBank
Gammaproteobacteria
Photobacterium
sp. SKA34
Åke Hagström
Released to GenBank
Gammaproteobacteria
Pseudoalteromonas tunicata
D2
Mary Ann Moran
Staffan Kjelleberg
Released to GenBank
Gammaproteobacteria
Photobacterium profundum
3TCK
Doug Bartlett
Released to GenBank
Gammaproteobacteria
Congregibacter litoralis
KT71
Rudolf Amann
Released to GenBank
Gammaproteobacteria
Idiomarina baltica
OS145
Ingrid Brettar
Manfred Höfle
Released to GenBank
Gammaproteobacteria
Vibrio angustum
S14
Rick Cavicchioli
Staffan Kjelleberg
Released to GenBank
Gammaproteobacteria
Vibrio
sp. MED222
Jarone Pinhassi
Carlos Pedrós-Alió
Released to GenBank
Gammaproteobacteria
Nitrosococcus oceani
AFC-27
Martin Klotz
Released to GenBank
Gammaproteobacteria
Vibrio splendidus
12B01
Martin Polz
Released to GenBank
Gammaproteobacteria
Vibrio alginolyticus
12G01
Martin Polz
Released to GenBank
Gammaproteobacteria
Alteromonas macleodii
'deep ecotype'
Francisco Rodriguez-Valera
Released to GenBank
Gammaproteobacteria
Reinekea
sp. MED297
Jarone Pinhassi
Carlos Pedrós-Alió
Released to GenBank
Gammaproteobacteria
Neptuniibacter caesariensis
MED92
Jarone Pinhassi
Carlos Pedrós-Alió
Released to GenBank
Gammaproteobacteria
Oceanobacter
sp. RED65
Jarone Pinhassi
Carlos Pedrós-Alió
Released to GenBank
Gammaproteobacteria
Marinomonas
sp. MED121
Jarone Pinhassi
Carlos Pedrós-Alió
Released to GenBank
Gammaproteobacteria
Unnamed Vibrionales bacterium SWAT-3
Farooq Azam
Released to GenBank
Gammaproteobacteria
Unnamed Alteromonadales bacterium TW-7
Farooq Azam
Released to GenBank
Gammaproteobacteria
Shewanella benthica
KT99
Art Yayanos
Released to GenBank
Gammaproteobacteria
Psychromonas
sp. CNPT3
Art Yayanos
Released to GenBank
Gammaproteobacteria
Moritella
sp. PE36
Art Yayanos
Released to GenBank
Gammaproteobacteria
Nitrococcus mobilis
Nb-231
John Waterbury
Released to GenBank
Gammaproteobacteria
Stenotrophomonas
sp. SKA14
Åke Hagström
Released to GenBank
Gammaproteobacteria
Vibrio shilonii
AK1
Eugene Rosenberg
Released to GenBank
Gammaproteobacteria
Methylophaga thiooxidans
DMS010
Hendrik Schaefer
Released to GenBank
Gammaproteobacteria
Marinobacter algicola
DG893
David Green
Released to GenBank
Gammaproteobacteria
Alcanivorax
sp. DG881
Christopher Bolch
Released to GenBank
Gammaproteobacteria
Unnamed gammaproteobacterium HTCC5015
Stephen Giovannoni
Kevin Vergin
Released to GenBank
Gammaproteobacteria
Vibrio parahaemolyticus
16
Rob Edwards
Released to GenBank
Gammaproteobacteria
Beggiatoa
sp. 'orange Guaymas'
Andreas Teske
In Progress
Gammaproteobacteria
Vibrio fischeri
MJ11
Eric Stabb
Edward Ruby
Released to GenBank
Gammaproteobacteria
Marinobacter
sp. ELB17
Bess Ward
Released to GenBank
Gammaproteobacteria
Unnamed gammaproteobacterium NOR51-B
Rudolf Amann
Bernhard Fuchs
Released to GenBank
Gammaproteobacteria
Unnamed gammaproteobacterium NOR5-3
Rudolf Amann
Bernhard Fuchs
Released to GenBank
Gammaproteobacteria
Unnamed gammaproteobacterium HTCC2148
Bernhard Fuchs
Rudolf Amann
Stephen Giovannoni
Released to GenBank
Gammaproteobacteria
Thioploca araucae
Tha-CCL
Victor Gallardo
In Progress
Gammaproteobacteria
Pseudoalteromonas luteoviolacea
2ta16
Eric Allen
Released to GenBank
Gammaproteobacteria
Pseudoalteromonas flavipulchra
2ta6
Eric Allen
Released to GenBank
Gammaproteobacteria
Alteromonas
sp. BB2AT2
Kay Bidle
Released to GenBank
Gammaproteobacteria
Pseudoalteromonas
sp. Tw2
Kay Bidle
Released to GenBank
Gammaproteobacteria
Alteromonas macleodii
EZ55
Erik Zinser
In Progress
Gammaproteobacteria
Unnamed OM60 gammaproteobacterium HIMB55
Michael Rappé
Released to GenBank
Gammaproteobacteria
Unnamed OM252 gammaproteobacterium HIMB30
Michael Rappé
Released to GenBank
Lentisphaerae
Lentisphaera araneosa
HTCC2155
Stephen Giovannoni
Jang-Cheon Cho
Released to GenBank
Planctomycetes
Blastopirellula marina
DSM3645
Rudolf Amann
Released to GenBank
Planctomycetes
Planctomyces maris
DSM8797
Rudolf Amann
Released to GenBank
Proteobacteria unclassified
Mariprofundus ferrooxydans
PV-1
David Emerson
Released to GenBank
Sphingobacteria
Microscilla marina
ATCC23134
Margo Haygood
Released to GenBank
Sphingobacteria
Kordia algicida
OT-1
Sang-Jin Kim
Released to GenBank
Sphingobacteria
Pedobacter
sp. BAL39
Åke Hagström
Released to GenBank
Thermotogae
Marinitoga piezophila
KA3T
Doug Bartlett
Elizaveta Bonch-Osmolovskaya
Released to GenBank
Verrucomicrobia
Unnamed Verrucomicrobiae bacterium DG1235
Mark Hart
Released to GenBank